Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs13195401 chr6:26463574 G/T 1.35E-8 288 25.57 29.43 9.77 KM Plot
KIRP rs13195402 chr6:26463575 G/T 1.35E-8 288 25.57 29.43 9.77 KM Plot
KIRP rs13195636 chr6:27509493 A/C 1.36E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13195728 chr6:27771106 T/C 1.32E-8 287 25.67 27.78 9.77 KM Plot
KIRP rs13197175 chr6:28129231 C/T 1.58E-8 287 25.58 29.43 9.77 KM Plot
KIRP rs13197176 chr6:28129232 C/T 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13197574 chr6:28060239 T/C 2.05E-8 288 25.6 27.8 9.77 KM Plot
KIRP rs13197633 chr6:28174757 G/A 1.42E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs13198716 chr6:26582035 A/G 1.2E-8 289 9.77 29.2 25.57 KM Plot
KIRP rs13198809 chr6:28323702 G/A 2.28E-8 284 25.6 27.78 9.77 KM Plot
KIRP rs13199649 chr6:27868792 C/T 1.72E-8 287 25.62 27.78 9.77 KM Plot
KIRP rs13199772 chr6:27834085 A/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs13199906 chr6:27834139 C/G 1.23E-8 289 25.62 27.78 9.77 KM Plot
KIRP rs13200214 chr6:28017250 C/T 2.22E-8 287 25.6 29.2 9.77 KM Plot
KIRP rs13201308 chr6:28130089 C/T 1.42E-8 288 25.58 29.2 9.77 KM Plot